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POLL Gene Curation

POLL Gene Curation

Gene-disease assertions not curated here (add link or write note): FROM HGMD (DM?): schizophrenia, head and neck squamous cell carcinoma, developmental disorder, congenital heart disease, prostate cancer). 1 DM duplication associated with autism

Disease

 

Disease

 

Inheritance

Autosomal recessive

Prevalence

 N/A

Rapid or full curation?

Rapid
Full

ClinGen / GenCC / BabySeq / HGMD

ClinGen - Dosage sensitivity curation: No evidence for triplosensitivity or haploinsufficiency. Tandem duplications that include LBX1, BTRC, and POLL, and had a breakpoint within FBXW4 (DAC) reported in individuals with split hand-foot malformation.

GENCC - no curations

HGMD - DM? Variants listed with several reported phenotypes (schizophrenia, head and neck squamous cell carcinoma, developmental disorder, congenital heart disease, prostate cancer). 1 DM duplication associated with autism. Did not review variants further.

Clinical Validity Scoring Notes and points

 N/A

Clinical Validity Points Total

 N/A

Clinical Validity Classification

Definitive (12pts)

Strong (12pts)

Moderate (7-11pts)

Limited (0.1-6pts)

No genetic evidence

Refuted

Disputed

Limited/No Genetic Evidence

Molecular Mechanism

Loss of function

Gain of function

Dominant negative

Unknown

Other

Loss of function / Gain of function / Dominant Negative

 

Penetrance

Complete (100%)

High (≥90%)

Reduced  (<90% and >10%)

Low (≤10%)

(list source/PMID)

 N/A

Age of Onset

Congenital

Pediatric

Adolescent

Adulthood

Late adulthood

(list source/PMID)

 N/A

Severity

 N/A

Clinical Features

 N/A

Gene SOPs & Notes

 N/A

Curation Summary:

 N/A

Case ID, Curator name, Date, Jira ticket link

Andrea Oza, 06/14/2023 https://broadinstitute.atlassian.net/browse/CIT-127