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UIMC1 Gene Curation

UIMC1 Gene Curation

Gene-disease assertions not curated here (add link or write note): autism, neurodevelopmental disorder breast/ovariant cancer, COVID-19 susceptibility (DM? in HGMD)

Disease

 

Disease

 

Inheritance

Autosomal recessive / autosomal dominant / X-linked

Prevalence

 

Source:

Rapid or full curation?

Rapid
Full

ClinGen / GenCC / BabySeq / HGMD

ClinGen - no GCEP curations, no evidence for haploinsufficiency/triplosensitivity

GenCC - no curations

OMIM - no conditions

HGMD - 25 variants, all DM?, autism, neurodevelopmental disorder breast/ovariant cancer, COVID-19 susceptibility. Did not evaluate further.

Clinical Validity Scoring Notes and points

Variant/Case Evidence:

Segregation Evidence:

Case/Control Evidence:

Experimental Evidence:

Source:

Clinical Validity Points Total

 

Source:

Clinical Validity Classification

Definitive (12pts)

Strong (12pts)

Moderate (7-11pts)

Limited (0.1-6pts)

No genetic evidence

Refuted

Disputed

Limited

Source:

Molecular Mechanism

Loss of function

Gain of function

Dominant negative

Unknown

Other

Loss of function / Gain of function / Dominant Negative

 

Penetrance

Complete (100%)

High (≥90%)

Reduced  (<90% and >10%)

Low (≤10%)

(list source/PMID)

 

Source:

Age of Onset

Congenital

Pediatric

Adolescent

Adulthood

Late adulthood

(list source/PMID)

 

Severity

 

Clinical Features

 

Sources:

Gene SOPs & Notes

 LINK if SOP is a long document. Short notes if it is easy to digest. eg. Last known truncating variant

Curation Summary:

 

Case ID, Curator name, Date, Jira ticket link

Andrea Oza, 06/14/2023