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XRCC6 Gene Curation

XRCC6 Gene Curation

Gene-disease assertions not curated here (add link or write note): HGMD variants (DM?) associated with myotrophic lateral sclerosis, autism, pterygium association, renal cell carcinoma risk

Disease

N/A

Disease

N/A

Inheritance

N/A

Prevalence

N/A

Rapid or full curation?

Rapid
Full

ClinGen / GenCC / BabySeq / HGMD

No ClinGen entries, No babyseq entries.
GenCC
Limited (Ambry genetics)
HGMD: NO DM variants present. ^ variants listed, reported phenotypes are amyotrophic lateral sclerosis, autism, pterygium association, renal cell carcinoma risk. Did not review further

Clinical Validity Scoring Notes and points

N/A

Clinical Validity Points Total

N/A

Clinical Validity Classification

Definitive (12pts)

Strong (12pts)

Moderate (7-11pts)

Limited (0.1-6pts)

No genetic evidence

Refuted

Disputed

Limited / no genetic evidence

Molecular Mechanism

Loss of function

Gain of function

Dominant negative

Unknown

Other

N/A

Penetrance

Complete (100%)

High (≥90%)

Reduced  (<90% and >10%)

Low (≤10%)

(list source/PMID)

 

N/A

Age of Onset

Congenital

Pediatric

Adolescent

Adulthood

Late adulthood

(list source/PMID)

N/A

Severity

N/A

Clinical Features

N/A

Gene SOPs & Notes

N/A

Curation Summary:

N/A

Case ID, Curator name, Date, Jira ticket link

Andrea Oza, 06/14/2023 https://broadinstitute.atlassian.net/browse/CIT-127