Version-stamped, standardized datasets
Precursor to automated analyses: aggregates all available sample batches into a single, uniformly-formatted bolus (one per disease X datatype), which can be immediately fed to algorithmic codes without further data preparation
Version-stamped packages of standard scientific analysis results
Automatically generated for dozens of algorithms: GISTIC, MutSig, Clustering, Correlation, ...
Version-stamped, biologist-friendly reports
Encapsulating analysis results in a form accessible to a wide audience, online for public browsing, and citable in the literature through DOIs
Version-stamped custom runs for TCGA analysis working groups
Performed by request in support of TCGA marker paper analysis, on a much shorter timescale than the monthly data runs and quarterly analysis runs.