TSR2 Gene Curation
Gene-disease assertions not curated here (add link or write note):
Disease | Diamond-Blackfan anemia 14 with mandibulofacial dysostosis |
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Inheritance | X-linked |
Prevalence | Overall incidence of Diamond-Blackfan 5-7 per million Source: https://medlineplus.gov/genetics/condition/diamond-blackfan-anemia/ |
Rapid or full curation? | Rapid Full |
Not in ClinGen (In Scope for General GCEP and CAYA GCEP) GenCC- XL Diamond-Blackfan anemia 14 with mandibulofacial dysostosis (Limited- Invitae) OMIM- ?Diamond-Blackfan anemia 14 with mandibulofacial dysostosis XL | |
Clinical Validity Scoring Notes and points | Variant/Case Evidence: PMID 24942156- Variant (c.191A>G p.Glu64Gly) in one male with features of Diamond-Blackfan anemia and facial features suggestive of Treacher Collins. This variant was also found in an male cousin with facial features but no overt features of Diamond-Blackfan but was reported to have “elevated mean corpuscular volume, eADA and hemoglobin F were consistent with DBA markers” by age 16. This segregation is through three unaffected females. Family previously described in PMID: 11424144 (0.5 pts) PMID 30503522- The same c.191A>G p.Glu64Gly was identified in two related individuals with DBA through WES (0.5 pts) Segregation Evidence: Case/Control Evidence: Experimental Evidence: PMID 30201955- Functional study in yeast cells with the E64G variant noted above showed impact to protein function (1 pt) PMID 29551269- Functional studies show impact mutations in TRS2; some studies seem to be a repeat of above. Source: |
Clinical Validity Points Total |
Source: |
Clinical Validity Classification Definitive (12pts) Strong (12pts) Moderate (7-11pts) Limited (0.1-6pts) No genetic evidence Refuted Disputed | Limited Source: |
Molecular Mechanism Loss of function Gain of function Dominant negative Unknown Other | Loss of function / Gain of function / Dominant Negative
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Penetrance Complete (100%) High (≥80%) Moderate (<80% and >20%) Low (≤20%) (list source/PMID) |
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Age of Onset Congenital Pediatric Adolescent Adulthood Late adulthood (list source/PMID) |
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Severity |
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Clinical Features |
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HPO Terms |
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Gene SOPs & Notes | LINK if SOP is a long document. Short notes if it is easy to digest. eg. Last known truncating variant |
Curation Summary |
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Case ID, Curator name, Date, Jira ticket link |
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