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General

Create a troubleshooting guide for PDMs/PMs/Analytics to use to determine what is broken (pipeline, ETL, DM refresh, etc) (AM/MM/RAS)

Error rendering macro 'jira' : Unable to locate Jira server for this macro. It may be due to Application Link configuration.

https://gpinfojira.broadinstitute.org/jira/browse/RPT-5574

Mariela and Rafael are working on this, Nasko is helping.

Expand dependency visualizer to be useful (e.g. for use in troubleshooting guide)

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  https://gpinfojira.broadinstitute.org/jira/browse/RPT-5310

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  https://gpinfojira.broadinstitute.org/jira/browse/RPT-5317 (RAS) 

Samples

Sample Initiation in Mercury: Datamarts and Tableau (KC, RAS)

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

Ticket TBD for other Pico work once pico is moved to Mercury. KC still a part of those conversations.

Extractions in Mercury: Datamarts and Tableau (KC, MM, RAS) (LIMS dependencies are mitigated with fix in QA 6/19)

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  

???CRSP kits sent/received, data into Tableau (KC, RAS)

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

Workflow has been defined for CRSP. Now we need to determine whether/where the data are in the MercuryDW. PRIORITY TBD

Non-CRSP Mercury receipt in Tableau

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

This should be doable using event_fact? received vs imported?


New Product Development


Quality

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  (Amy)   NOTE: THIS WON'T BE THIS Q

RPT-4961: 3/4 QCs are in Tableau. One waiting for Mercury


Sequencing Technology

(tick) Broad West: Show new parsed SAV data in Tableau (KC, RAS)

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

Data are ready for visualization. It can't be the same report as BroadEast bc data structure is different (e.g. no organic run) but a simple monitoring report should be easy. Early Q1.

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  (MM)

(tick) Autopush to Cloud

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  (Nasko, Chris)

(tick) Peltier logs

Unable to locate Jira server for this macro. It may be due to Application Link configuration.  (RAS)

Seq plating report in Tableau

Unable to locate Jira server for this macro. It may be due to Application Link configuration.

Somatic Exome

(tick) RPT-5218 - New LCSET type for Twist aka "Somatic Exome" (AB)

RPT-5629 - Reporting for Twist Somatic Exome (MM)

Germline Exome improvements

(tick) RPT-5431 Changes in SGE and PCR +/- workflow on JIRA (AB, RAS)

Financial Reporting

(tick)  Unable to locate Jira server for this macro. It may be due to Application Link configuration.  (ZL) (complete until we go live)


DEPENDENCIES

GPLIM-6127

GPLIM-6126

GPLIM-6069

DDP (ticket unknown)

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