Terra Core Data Model Initiative

Welcome!

The Terra Interoperability Model (TIM) represents a set of core concepts used across multiple projects.  This initiative is intended to:

  • Facilitate sharing data across datasets by defining core concepts based on industry standard ontologies and vocabularies
  • Provide resources such as recommended ontologies, examples and other relevant reference materials.

All are welcome to utilize the resources and please feel free to reach out to us with any questions!  kreinold@broadinstitute.org

See us on GitHub!

See the DSP Data Modeling Team pages!

Ontologies we use (and recommend) are also in github, in Ontologies

Terra Core Data Model Team

Current Members: Larry Babb, Sid Cox, Paul Clemons, Rachel Liao, Eugenio Mattei, Marco Ocana, Kathy Reinold (Chairperson), Kathleen Tibbetts, Noam Shoresh, Timothy Tickle, Kyle Vernest, Andrew Zimmer

Governance

  • Chairperson schedules meetings, drives activities and ensures the Terra Core Data Model Initiative space is maintained.
  • Management Advisor assures the Team includes key representation across Broad Institute and alignment with DSP Objectives 
  • Meetings and/or Workshops will be scheduled 4-8 times per year but the frequency is subject to change.
    • Workshops are where we thrash out the model definition
    • Meetings are used to share information or define objectives/agendas

Membership: 

  • Members consist of Data Stewards, Data Owners, Researchers and Data Modelers
  • Nominee names will be submitted to the Chairperson, reviewed by current members with final approval by the Chairperson & Management Advisor.   
  • Proposed commitment: minimum 6 months

2022 Objectives

  • Tactical - current objectives
    • Create official version 1 of Terra Interoperability Model
    • Document current recommended ontologies
    • Define the "Findability Subset"
      • Core entities and properties that will enable cross-dataset search
      • This will be extended over time
    • Update the model based on
      • Terra Repository cross-dataset search testing
      • Product team priorities
      • Experience using the model for selected datasets
  • Strategic - efforts to define longer term goals
    • Renaming the model to encourage use by a broader audience
    • Restructuring the model as follows to build upon core functionality
      • core – Findability subset
      • extended model - capture provenance and additional detail for assays and other processes
      • TDR model - adding Terra-specific support for more effectively mapping data to TIMinTDR schema

Alumni Contributors

  • Clare Bernard, Sinéad Chapman

Guest Subject Matter Experts

  • Orr Ashenberg, Tommaso Biancalani, Jean Chang, Charles Epstein, Caroline Porter, Gopal Sarma

Site Map


Recent space activity