nodeName	formalName
   patient.bcr_patient_barcode	tcga_participant_barcode
   =floor(-as.numeric(patient.days_to_birth)/365.2422)	years_to_birth
"   =ifelse( patient.follow_ups.follow_up.vital_status  %in% c(dead, deceased) | patient.vital_status  %in% c(dead, deceased) ,1, 0)"	vital_status
"   =ifelse(patient.clinical_cqcf.days_to_death ==NA & patient.days_to_death ==NA & patient.follow_ups.follow_up.days_to_death ==NA,NA, max(as.numeric( patient.clinical_cqcf.days_to_death ), as.numeric( patient.days_to_death ), as.numeric( patient.follow_ups.follow_up.days_to_death ),na.rm=T))"	days_to_death
"   =ifelse(patient.follow_ups.follow_up.vital_status ==deceased | patient.vital_status ==deceased,NA,ifelse(patient.days_to_last_followup ==NA & patient.follow_ups.follow_up.days_to_last_followup ==NA,NA, max(as.numeric( patient.days_to_last_followup ), as.numeric( patient.follow_ups.follow_up.days_to_last_followup ), na.rm=T)))"	days_to_last_followup
   patient.stage_event.pathologic_stage	neoplasm_diseasestage
   patient.stage_event.tnm_categories.pathologic_categories.pathologic_t	pathology_T_stage
   patient.stage_event.tnm_categories.pathologic_categories.pathologic_n	pathology_N_stage
   patient.stage_event.tnm_categories.pathologic_categories.pathologic_m	pathology_M_stage
"   =paste(admin.day_of_dcc_upload, admin.month_of_dcc_upload, admin.year_of_dcc_upload, sep = -)"	dcc_upload_date
   patient.gender	gender
"   =ifelse(patient.radiation_therapy == NA, NA, yes)"	radiation_therapy
"   =ifelse((patient.radiations.radiation.regimen_indication %in% adjuvant), no, yes)"	radiations_radiation_regimenindication
   patient.race	race
   patient.ethnicity	ethnicity
   admin.batch_number	batch_number
   patient.tumor_tissue_site	primary_site_of_disease
"   =ifelse(patient.days_to_initial_pathologic_diagnosis != 0, patient.days_to_initial_pathologic_diagnosis, patient.year_of_initial_pathologic_diagnosis)"	date_of_initial_pathologic_diagnosis
   patient.days_to_last_known_alive	days_to_last_known_alive
   patient.karnofsky_performance_score	karnofsky_performance_score
   patient.histological_type	histological_type
   patient.number_pack_years_smoked	number_pack_years_smoked
   patient.number_of_lymphnodes_positive_by_he	number_of_lymph_nodes
   patient.weight	weight_kg_at_diagnosis
   patient.follow_ups.follow_up.person_neoplasm_cancer_status	tumor_status
   patient.clinical_cqcf.country	tumor_sample_procurement_country
   patient.neoplasm_histologic_grade	neoplasm_histologic_grade
   patient.stopped_smoking_year	tobacco_smoking_year_stopped
   patient.number_pack_years_smoked	tobacco_smoking_pack_years_smoked
   patient.tobacco_smoking_history	tobacco_smoking_history
   patient.age_began_smoking_in_years	patient.agebegansmokinginyears
   patient.radiations.radiation__2.radiation_treatment_ongoing	radiation_treatment_adjuvant
   patient.radiations.radiation.radiation_dosage	radiation_total_dose
   patient.radiations.radiation.radiation_type	radiation_therapy_type
   patient.follow_ups.follow_up.radiation_supplemental.external_beam_radiation_therapy_administered_status	radiation_therapy_status
   patient.radiations.radiation__2.anatomic_treatment_site	radiation_therapy_site
   patient.radiations.radiation__2.units	radiation_adjuvant_units
   patient.total_number_of_pregnancies	pregnancies_count_total
   patient.pregnancy_stillbirth_count	pregnancies_count_stillbirth
   patient.patient_pregnancy_spontaneous_abortion_count	pregnancy_spontaneous_abortion_count
   patient.number_of_successful_pregnancies_which_resulted_in_at_least_1_live_birth	pregnancies_count_live_birth
   patient.patient_pregnancy_therapeutic_abortion_count	pregnancy_therapeutic_abortion_count
   patient.ectopic_pregnancy_count	pregnancies_count_ectopic
   patient.cervical_carcinoma_pelvic_extension_text	cervical_carcinoma_pelvic_extension_text
"   =paste(patient.lymph_node_location_positive_pathology_names.lymph_node_location_positive_pathology_name, patient.lymph_node_location_positive_pathology_text, sep = |)"	lymph_node_location
"   =ifelse(patient.cervical_neoplasm_pathologic_margin_involved_text != other location, specify, patient.cervical_neoplasm_pathologic_margin_involved_type, patient.cervical_neoplasm_pathologic_margin_involved_text )"	pos_lymph_node_location
   patient.menopause_status	menopause_status
   patient.lymphovascular_invasion_indicator	lymphovascular_involvement
   patient.number_of_lymphnodes_positive_by_he	lymph_nodes_examined_he_count
   patient.lymph_node_examined_count	lymph_nodes_examined
   patient.keratinizing_squamous_cell_carcinoma_present_indicator	keratinization_squamous_cell
   patient.year_of_initial_pathologic_diagnosis	initial_pathologic_dx_year
"   =paste(patient.hysterectomy_performed_type, patient.hysterectomy_performed_text, sep = |)"	hysterectomy_type
   patient.birth_control_pill_history_usage_category	history_hormonal_contraceptives_use
   patient.height	height_cm_at_diagnosis
"   =paste(patient.diagnostic_ct_result_outcomes.diagnostic_ct_result_outcome,  patient.diagnostic_ct_result_outcomes.diagnostic_ct_result_outcome__2, patient.diagnostic_ct_result_outcomes.diagnostic_ct_result_outcome__3, patient.diagnostic_ct_result_outcomes.diagnostic_ct_result_outcome__4, patient.diagnostic_ct_result_outcomes.diagnostic_ct_result_outcome__5, patient.diagnostic_ct_result_outcomes.diagnostic_ct_result_outcome__6, patient.fdg_or_ct_pet_performed_outcomes.fdg_or_ct_pet_performed_outcome, patient.fdg_or_ct_pet_performed_outcomes.fdg_or_ct_pet_performed_outcome__2, patient.fdg_or_ct_pet_performed_outcomes.fdg_or_ct_pet_performed_outcome__3, patient.fdg_or_ct_pet_performed_outcomes.fdg_or_ct_pet_performed_outcome__4, patient.fdg_or_ct_pet_performed_outcomes.fdg_or_ct_pet_performed_outcome__5, patient.fdg_or_ct_pet_performed_outcomes.fdg_or_ct_pet_performed_outcome__6, sep = |)"	fedpet_or_ct_results
   patient.cervical_carcinoma_corpus_uteri_involvement_indicator	corpus_involvement
   patient.follow_ups.follow_up.chemotherapy_regimen_types.chemotherapy_regimen_type	chemo_concurrent_type
   patient.standardized_uptake_value_cervix_uteri_assessment_measurement	cervix_suv_results
   patient.death_cause_text	cause_of_death
   patient.stage_event.tnm_categories.pathologic_categories.pathologic_t	ajcc_tumor_pathologic_pt
   patient.age_at_initial_pathologic_diagnosis	age_at_diagnosis
   patient.stage_event.clinical_stage	stage_event.clinical_stage
   patient.residual_tumor	completeness_of_resection
   patient.year_of_tobacco_smoking_onset	year_of_tobacco_smoking_onset
   patient.examinations.examination.karnofsky_performance_score	examinations_examination_karnofskyperformancescore
   patient.tumor_grade	tumor_grade
"   =ifelse(is.na(patient.tumor_stage), NA, patient.tumor_stage)"	tumor_stage
"   =ifelse(patient.days_to_tumor_recurrence != NA, 1, 0)"	tumor_recurrence_status
   patient.days_to_tumor_recurrence	days_to_tumor_recurrence
"   =ifelse(patient.chemo_therapy == NA, NA, yes)"	chemotherapy
   patient.clinical_cqcf.gleason_score_combined	gleason_score_combined
   patient.clinical_cqcf.gleason_score_primary	gleason_score_primary
   patient.clinical_cqcf.gleason_score_secondary	gleason_score_secondary
   patient.clinical_cqcf.highest_gleason_score	highest_gleason_score
   patient.stage_event.gleason_grading.gleason_score	gleason_score
   patient.clinical_cqcf.psa_result_preop	psa_result_preop
   patient.clinical_cqcf.days_to_preop_psa	days_to_preop_psa
   patient.stage_event.psa.psa_value	psa_value
   patient.stage_event.psa.days_to_psa	days_to_psa
   patient.days_to_submitted_specimen_dx	days_to_submitted_specimen_dx
   patient.melanoma_ulceration_indicator	melanoma_ulceration
   patient.primary_neoplasm_melanoma_dx	melanoma_primary_known
   patient.breslow_depth_value	Breslow_thickness
   patient.person_lifetime_risk_radiation_exposure_indicator	radiation_exposure
   patient.extrathyroid_carcinoma_present_extension_status	extrathyroidal_extension
   patient.primary_neoplasm_focus_type	multifocality
"   =max(patient.neoplasm_dimension.neoplasm_depth, patient.neoplasm_dimension.neoplasm_length, patient.neoplasm_dimension.neoplasm_width)"	tumor_size